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determine z range for localization stacks from widefield stacks and queue them - #906

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barentine wants to merge 18 commits into
python-microscopy:masterfrom
barentine:fullzacq
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determine z range for localization stacks from widefield stacks and queue them#906
barentine wants to merge 18 commits into
python-microscopy:masterfrom
barentine:fullzacq

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@barentine

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posting here for discussion - one of the three options suggested in #898. "works", but with a Hoechst stain works more for finding the center of focus rather than the bounds (not robust enough for production runs at the moment and I need to tack back to other priorities).

Proposed changes:

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codecov Bot commented Feb 28, 2021

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Codecov Report

❌ Patch coverage is 11.11111% with 120 lines in your changes missing coverage. Please review.
✅ Project coverage is 11.30%. Comparing base (5165d2d) to head (c45c908).
⚠️ Report is 2385 commits behind head on master.

Files with missing lines Patch % Lines
PYME/recipes/focus.py 0.00% 80 Missing ⚠️
PYME/recipes/acquisition.py 31.42% 24 Missing ⚠️
PYME/Acquire/protocol.py 23.52% 13 Missing ⚠️
PYME/Acquire/SpoolController.py 0.00% 2 Missing ⚠️
PYME/recipes/modules.py 0.00% 1 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##           master     #906      +/-   ##
==========================================
- Coverage   11.30%   11.30%   -0.01%     
==========================================
  Files         624      625       +1     
  Lines       71803    71934     +131     
==========================================
+ Hits         8117     8131      +14     
- Misses      63686    63803     +117     

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