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# PIP requirements
# NB - this might be incomplete / buggy, the conda route is currently more reliable
#
numpy>=1.14.* # we build and test against 1.14, but should work against any higher version. Try numpy==1.14.* if you run into issues.
scipy
matplotlib
wxpython>=4.1
tables #<=3.4.2
pyopengl
traits
traitsui
pillow
six
future
requests
pyyaml
psutil
ujson
jinja2
toposort
setuptools < 60 # setuptools >= 60 has removed compiler support
#distutils <
pymecompress >=0.2
zeroconf<=0.26.3
cython # do we need this for a non-dev install?
#pyfftw3; python_version < '3.0'
pyfftw #; python_version > '3.0'
mpld3 # used for graphs in html recipe output, potentially OK to ommit
cherrypy
pandas
scikit-image #both skimage and sklearn have the potential to generate dependency clashes. Not strictly required for core functionality.
scikit-learn
# docutils and sphinx are used for formatting help text in the recipe editor. Not super critical and can be ommitted if you want a lighter weight install.
docutils
sphinx
# there is currently no pip packages for dispatch, so install directly from github (NOTE: this will prevent us from moving requirements to setup.py and having them
# automatically installed in the future)
# TODO - project is no longer maintained - copy move to PYME/contrib and maintain our own copy?
#dispatch
git+https://github.com/olivierverdier/dispatch.git@master#egg=dispatch; python_version < '3.0'
#########################
# Optional dependencies
#########################
# These support functionality which is not core
# django is used for the full-blown clusterUI (see cluster analysis docs) but is not required for most analysis tasks. Don't install by default as backwards
# compatibility between django versions is not great and it's hard to keep this tracking the latest security fixes. Installing a (potentially old and insecure)
# version of django should be a deliberate choice.
# django==2.1
#networkx
#pywin32 [win]
#FIXME for py3k
#shapely [osx and py2k]
#pyro [py2k]# install on py 2.7 if you want to use old style distributed analysis
#pycairo
#mayavi # 3D volume rendering, alternative 3D isosurface implementation