This is the documentation for the python-microscopy environment, set of tools for optical microscopy, and in particular localization - based super-resolution microscopy.

This documentation is currently very much a work in progress and is far from being complete. The API documentation, in particular could use a lot of work. Hopefully it's enough to get you started.

.. toctree::
    :caption: Installation
    :maxdepth: 1

    Installation/Installation

.. toctree::
   :caption: User Guide
   :maxdepth: 2

   PYMEAcquire
   Analysis
   PYMEVis
   component_programs
   LocalisationAnalysis
   cluster/PYMECluster

.. toctree::
   :caption: Development / Hacking
   :maxdepth: 2

   hacking