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1. MD_membrane_proteins MD_membrane_proteins Public

   Scripts for removing water molecules of membrane-proteins in AMBER PDB format. Various MD data analysis scripts.

   Python

2. CSA CSA Public

   Python implementation of conformational space annealing

   Python 2 2

3. scripts-distance-fluctuations scripts-distance-fluctuations Public

   Calculates distance fluctuations of atoms from long MD trajectories

   Python 1 1

4. linear_programming linear_programming Public

   Python 1

5. Network_clustering Network_clustering Public

   Python scripts used for DREAM11: Module disease identification

   Python