Periodically build notebooks to ensure they haven't broken #43

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1. yochannah

   added

   help wanted

   on Jun 24, 2019
2. niveditarufus commented on Mar 7, 2020

   

   niveditarufus

   on Mar 7, 2020

   Contributor

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   I would really like to look into this, can it be assigned to me?
3. mkhoshle commented on Mar 9, 2020

   

   mkhoshle

   on Mar 9, 2020

   Last edited by mkhoshle

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   @yochannah I am an outreachy applicant and I am interested to pick up this issue. Can I work on this issue?
4. mkhoshle commented on Mar 9, 2020

   

   mkhoshle

   on Mar 9, 2020

   Last edited by mkhoshle

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   @yochannah I used this package testipynb. I added a script that tests all *.ipynb files and reports whether they are failed or passed.
   There only two things that need to be added:

   1. automize the file so that it checks all the files at a specific time every day. Something like a Cron job?
   2. Do you want to look at all ipynb files in a specific folder or the whole repository?
      Here is the code, I just need you to confirm for me that the above changes are fine.

   import unittest
   
   NBDIR = '/Users/mahzadkhoshlessan/Desktop/intermine-ws-python-docs'
   
   Test = testipynb.TestNotebooks(directory=NBDIR, timeout=2100)
   TestNotebooks = Test.get_tests()
   
   if __name__ == "__main__":
       unittest.main()
   

   And here is how the output looks like:
   Output
5. leoank commented on Mar 10, 2020

   

   leoank

   on Mar 10, 2020

   Member

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   @niveditarufus @mkhoshle Both of you can try solving this issue. We won't judge you based on who has the best implementation here. The goal here is to demonstrate your collaboration skills(git, PR, communication).
6. leoank

   assigned

   mkhoshle

   and

   niveditarufus

   on Mar 10, 2020
7. niveditarufus commented on Mar 10, 2020

   

   niveditarufus

   on Mar 10, 2020

   Last edited by niveditarufus

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   Submitted a pull request which might close the issue. @leoank @uosl @yochannah Kindly review it.
8. yochannah

   added a commit that references this issue on Jun 5, 2020

   Merge pull request #47 from niveditarufus/nivedita-test-gitlab

   ...

   9d5a2c6