A Python application that uses Batch to process genomic files in parallel with the SPAdes assembly tool. Original tutorial shows how to upload files into a container in a Storage account before processing them in Batch. This example assumes fastq.gz files are already available in a container.

• Azure Batch account and linked general-purpose Azure Storage account
• Python 2.7 or 3.3 or later including pip

• Clone repository git clone https://github.com/blue-moon22/azure-batch-python-example.git
• Follow original tutorial Run a parallel workload with Azure Batch using the Python API.

• Azure Batch documentation
• Azure Batch code samples

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