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Commits on Apr 19, 2017

• Dak’s new unit test that demonstrates a problem when parsing FASTA files

  andreasprlic

  committed
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Commits on Apr 13, 2017

• Exposing alignment mappings to be able to map query sequence to target sequence

  valasatava

  committed
  c29825e

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Commits on Apr 4, 2017

• Refactoring FileDownload util to be a part of biojava-core project

  valasatava

  committed
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Commits on Apr 3, 2017

• Adding a method to check whether an array of sequences contains at least two sequences of an equal length

  valasatava

  committed
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Commits on Mar 30, 2017

• [maven-release-plugin] prepare for next development iteration

  josemduarte

  committed
  c050011

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• [maven-release-plugin] prepare release biojava-5.0.0-alpha8

  josemduarte

  committed
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• [maven-release-plugin] prepare for next development iteration

  josemduarte

  committed
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• [maven-release-plugin] prepare release biojava-5.0.0-alpha8

  josemduarte

  committed
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Commits on Mar 29, 2017

• [maven-release-plugin] prepare for next development iteration

  josemduarte

  committed
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• [maven-release-plugin] prepare release biojava-5.0.0-alpha8

  josemduarte

  committed
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Commits on Mar 28, 2017

• hashCode() added for all the classes where added an equals()

  valasatava

  committed
  2d90038

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• Merge branch 'sequenceEquals' of https://github.com/valasatava/biojava into sequenceEquals

  valasatava

  committed
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• hashCode added to SequenceFileProxyLoader class

  valasatava

  committed
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• adding a sequence.equals(Sequence) and hashCode class to sequences.

  valasatava

  committed
  3dadec1

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• changing equals(Sequence) method signature to equals(Object)

  andreasprlic

  committed
  7587b03

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• adding a sequence.equals(Sequence) and hashCode class to sequences.

  valasatava

  committed
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Commits on Mar 18, 2017

• Revert "[maven-release-plugin]prepare release biojava-5.0.0-alpha7"

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  josemduarte

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• [maven-release-plugin]prepare release biojava-5.0.0-alpha7

  

  Jenkins

  committed
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Commits on Feb 8, 2017

• Merge branch 'upstream_master'

  emckee2006

  committed
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• Add in previously missed protein aliases...

  emckee2006

  committed
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Commits on Nov 9, 2016

• Fix #596. Remove test for GenBank identifier parsing

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  sbliven

  committed
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Commits on Sep 14, 2016

• Also get short name when getting other protein aliases

  emckee2006

  committed
  9b0d208

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Commits on Aug 25, 2016

• Merge branch 'pr/44'

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  emckee2006

  committed
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• add ability to pull gene and protein aliases from uniprot

  emckee2006

  committed
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Commits on Aug 23, 2016

• Merge pull request #555 from andreasprlic/master

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  sbliven

  authored
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Commits on Aug 21, 2016

• GenericInsdcHeaderFormat: Fixed formatting codes.

  andviane

  committed
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Commits on Aug 18, 2016

• making output less verbose

  andreasprlic

  committed
  56e81e6

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• setting default log level to warn

  andreasprlic

  committed
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• making output less verbose

  andreasprlic

  committed
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Commits on Aug 16, 2016

• [maven-release-plugin]prepare for next development iteration

  

  Jenkins

  committed
  2a14437

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• [maven-release-plugin]prepare release biojava-5.0.0-alpha6

  

  Jenkins

  committed
  18dcaba

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• updating to latest version of Cobertura tests. Now can successfully run locally.

  andreasprlic

  committed
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Commits on Jul 4, 2016

• Merge pull request #525 from andreasprlic/master

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  josemduarte

  authored
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• Merge pull request #519 from DevFactory/release--inefficient-string-buffering-fix-1

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  josemduarte

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Commits on Jul 1, 2016

• Merge pull request #528 from DevFactory/release--toString()-should-never-be-called-on-a-String-object-fix-1

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  andreasprlic

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