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1. spatial-molecular-image-registration-with-microscope-image- spatial-molecular-image-registration-with-microscope-image- Public

   using matlab to manually register H&E image to spatial transcripts data

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2. concordance_tech_compare_ggscatter_topDEgene concordance_tech_compare_ggscatter_topDEgene Public

   R 1

3. Fiji_StarDist_segmentaion Fiji_StarDist_segmentaion Public

   imageJ Fiji- install and use StarDist to do segmentation of nuclei H&E and fluorescent image

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4. convert_tif_ometif convert_tif_ometif Public

   convert tif file to ome.tif

   Python