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Commits on Oct 2, 2014

• Removing duplicate PDB_DIR definitions.

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  sbliven

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Commits on Oct 1, 2014

• More consolidation on PDB_DIR/PDB_CACHE_DIR reading

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  josemduarte

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Commits on Sep 28, 2014

• Improving and unifying the setting of PDB_DIR and PDB_CACHE_DIR

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  josemduarte

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Commits on Sep 20, 2014

• Towards fixing #148, compiles but some tests don't pass yet

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  josemduarte

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Commits on Jun 3, 2014

• Simplifying dotplot graphics

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  sbliven

  committed
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• Adding black/white gradient to dotplot panels.

  sbliven

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• Fix infinite recursion with DUPLICATE_LEFT

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  sbliven

  committed
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• Added nice names to DuplicationHints

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  sbliven

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• Adding Enums to ParameterGUI

  sbliven

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• Trim spaces off structure names.

  sbliven

  committed
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• Improve error messages in AlignmentGui

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  sbliven

  committed
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Commits on Mar 24, 2014

• moving slow running unit tests into integrationtests package

  andreasprlic

  committed
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Commits on Mar 13, 2014

• #48 altlocs are now getting rotated for display

  andreasprlic

  committed
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Commits on Mar 7, 2014

• Fixing compilation bug.

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  sbliven

  committed
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• Reducing jmol output

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  sbliven

  committed
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Commits on Jan 23, 2014

• fixing wrong override annotation

  andreasprlic

  committed
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• setting SCOP version to be the same as is used at RCSB for now

  andreasprlic

  committed
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Commits on Jan 17, 2014

• adding support for jmol 14 series

  andreasprlic

  committed
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Commits on Nov 20, 2013

• updating example to latest API

  andreasprlic

  committed
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Commits on Oct 29, 2013

• Merge branch 'master' of github.com:biojava/biojava

  

  Andreas Prlic

  committed
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• adding demo for cath domains

  

  Andreas Prlic

  committed
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• demo of working with large structures

  

  Andreas Prlic

  committed
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Commits on Oct 16, 2013

• remove unneeded imports

  emckee2006

  committed
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Commits on Sep 18, 2013

• working on validation file parser

  

  Andreas Prlic

  committed
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Commits on Aug 11, 2013

• More work on Genbank files, bringing them inline with interfaces.

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  Karl Nicholas

  authored and

  Karl Nicholas

  committed
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Commits on Jul 3, 2013

• Fixed demo: can't use same structure.

  dmyersturnbull

  committed
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Commits on Jun 25, 2013

• Added a demo for using FastaAFPChainConverter for display.

  dmyersturnbull

  committed
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Commits on Jun 20, 2013

• Fixing compilation error.

  dmyersturnbull

  committed
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Commits on Jun 11, 2013

• Removing hard-coded PDB_DIR settings.

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  sbliven

  committed
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Commits on Apr 18, 2013

• Adding model number to jmol selection criteria.

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  sbliven

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Commits on Mar 20, 2013

• fixing broken print functionality

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  andreasprlic

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Commits on Mar 19, 2013

• Reverting debugging statements introduced in r10020

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  sbliven

  committed
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Commits on Mar 6, 2013

• cleaning up compile warnings

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  andreasprlic

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Commits on Mar 1, 2013

• Refactored RotationAxis & added documentation

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  sbliven

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Commits on Feb 27, 2013

• new method to create jmol script

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  andreasprlic

  committed
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