-
Notifications
You must be signed in to change notification settings - Fork 0
Expand file tree
/
Copy pathTestConfiguration.java
More file actions
62 lines (52 loc) · 1.96 KB
/
TestConfiguration.java
File metadata and controls
62 lines (52 loc) · 1.96 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
package configuration;
public class TestConfiguration {
private Configuration config;
public TestConfiguration (Configuration config) {
this.config=config;
}
public boolean test() {
boolean ok = true;
//check required parameters
ok = ok && config.getModelpath()!=null;
ok = ok && config.getOutputPath()!=null;
if (!ok) {
System.err.println("Missing configuration options. See example.xml for all required options.");
return ok;
}
//check datafiles
for (Datafile df : config.getInputfiles()) {
ok = ok && df.getDatentyp()!=null;
ok = ok && df.getPath()!=null;
ok = ok && df.getFiletype()!=null && (df.getFiletype().equals(Consts.csvFlag) || df.getFiletype().equals(Consts.satzartFlag));
if (!ok) {
System.err.println("Error with configuration: Datafile "+ df.getDatentyp());
return ok;
}
}
//check DDI
DDIConfiguration ddiconfig = config.ddiconfiguration;
if (ddiconfig!= null) {
ok = ok && ddiconfig.getDatentyp()!=null;
ok = ok && ddiconfig.getFilePatient2drug()!=null;
ok = ok && ddiconfig.getFileDruginfo()!=null;
ok = ok && ddiconfig.getFileDrug2substance()!=null;
ok = ok && ddiconfig.getFileSubstance2interaction()!=null;
ok = ok && ddiconfig.getFileInteractioninfo()!=null;
ok = ok && ddiconfig.getFileInteraction2meta()!=null;
ok = ok && ddiconfig.getDrugfield()!=null;
ok = ok && ddiconfig.getDatefield()!=null;
ok = ok && ddiconfig.getDrugreachfield()!=null;
ok = ok && ddiconfig.getDrugreachStandard()!=null;
ok = ok && ddiconfig.getSubstancefield()!=null;
ok = ok && ddiconfig.getInteractionfield()!=null;
ok = ok && ddiconfig.getMeta_interactionfield()!=null;
ok = ok && ddiconfig.getStartfield()!=null;
ok = ok && ddiconfig.getEndfield()!=null;
if (!ok) {
System.err.println("Error with DDI configuration. See example.xml for all required options.");
return ok;
}
}
return ok;
}
}