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1. Retreival-and-summery-of-historical-climate-data-from-selected-locations Retreival-and-summery-of-historical-climate-data-from-selected-locations Public

   The functions described here can be used to download summerize historical climate data from the NOAA.

   R

2. Missing-genotype-imputation Missing-genotype-imputation Public

   Given a genotype data where the genotypes are coded as 0, 1, 2 and missing genotpes coded as NA, the function replaces the missing call by sampling from {0,1,2} with probabilities for each given by…

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3. Crossvalidating-breed-prediction-by-selected-markers Crossvalidating-breed-prediction-by-selected-markers Public

   This code is for performing k-fold crossvalidation of phenotype prediction using SNP genotype data.

   R

4. Identifying-PCA-correlated-SNP-for-population-structure-identification Identifying-PCA-correlated-SNP-for-population-structure-identification Public

   This R code is an implementation of a method described by Paschou et al in a serious of articles (Paschou et al 2007; Paschou et al 2008; Paschou et al 2010; Lewis et al 2011). Singular value decom…

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5. Selecting-breed-informativs-genetic-markers-for-efficint-identification-of-breed-composition Selecting-breed-informativs-genetic-markers-for-efficint-identification-of-breed-composition Public

   (The code shown here is obsolete and can/should be replaced by another small piece of code described in another repository here) The function aims to identify a subset of SNP which can be used to i…

   R

6. Identifying-fluorescent-probes-in-confocal-image-of-neurons Identifying-fluorescent-probes-in-confocal-image-of-neurons Public

   R 1