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1. Commits on Jun 21, 2022

   • Fix compiler warnings (#35)

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     gdoubleyew

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2. Commits on Apr 11, 2022

   • Use log4cpp in Seek tools. Make async function for pvalueGenesQuery (#34)

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     gdoubleyew

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3. Commits on Apr 14, 2020

   • formatting plus functional changes

     grapesmoker

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4. Commits on Oct 28, 2011

   • Merged Harvard changeset 445 by Curtis Huttenhower: Add absolute value criterion to CDat filtering and Dat2Graph

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5. Commits on Aug 24, 2011

   • updated Answerer to take a target prior and

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     pazpark

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6. Commits on May 18, 2011

   • Added DChecker option -l to filter positive genes

     

     Aaron Wong

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7. Commits on Mar 5, 2011

   • merged qdab support and additional functionalities for Dat2Dab

     pazpark

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8. Commits on Feb 9, 2011

   • Fix bug in CDat::Open( CDat, vector<CGenes>*, ... ) for importing known negatives

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     chuttenh

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9. Commits on Apr 21, 2010

   • Update documentation to include new email and Mercurial repo location

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     chuttenh

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10. Commits on Apr 18, 2010

    • Add covariate mutual information approximation to Counter

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      chuttenh

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11. Commits on Apr 4, 2010

    • Add OLS regression to CMath

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      chuttenh

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    • Add asymmetric sigmoid normalization to CDat and Normalizer

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      chuttenh

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12. Commits on Mar 31, 2010

    • Add incident-only and random scramble options to Answerer

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      chuttenh

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13. Commits on Mar 23, 2010

    • Add full meta-analytic CDat combination to Combiner

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      chuttenh

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14. Commits on Mar 13, 2010

    • Add AUCn scoring to DChecker (AUC for first n negatives)

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      chuttenh

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15. Commits on Feb 18, 2010

    • Add per-gene weights to HEFalMp/bioPIXIE queries in CDat

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      chuttenh

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16. Commits on Nov 28, 2009

    • Add several missing header includes

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      chuttenh

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17. Commits on Jun 9, 2009

    • [svn r427] Fix OntoShell bug in calculating indirect annotation counts

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      chuttenh

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18. Commits on May 24, 2009

    • [svn r421] Add SVDer from AJ Sedgewick's JP

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      chuttenh

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19. Commits on Feb 5, 2009

    • [svn r411] Add maximum motif cap for COALESCE

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      chuttenh

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20. Commits on Jun 26, 2008

    • [svn r342] Add configurable normalization to CDat

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      chuttenh

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21. Commits on Apr 8, 2008

    • [svn r301] Add Maria to author list

      

      chuttenh

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    • [svn r299] Update license comment

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      chuttenh

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22. Commits on Apr 5, 2008

    • [svn r290] Add more tool documentation

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      chuttenh

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23. Commits on Mar 31, 2008

    • [svn r282] Add tool documentation for Answerer through BNTester

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      chuttenh

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24. Commits on Mar 24, 2008

    • [svn r281] Add documentation to Answerer

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      chuttenh

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25. Commits on Mar 17, 2008

    • [svn r271] Add a bunch of additional library documentation

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      chuttenh

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26. Commits on Mar 13, 2008

    • [svn r270] Update namespace from libBioUtils to Sleipnir

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      chuttenh

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27. Commits on Feb 6, 2008

    • [svn r259] Move files around #1: rough outlines

      

      chuttenh

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