Issues

• NOTE: use <- instead of =

  Bioconductor/GenomicDataCommons#119 · Filter by author LiNk-NY opened on Feb 13, 2025

• add blurb regarding potential conflicts when loading dplyr

  enhancement
  Bioconductor/GenomicDataCommons#118 · Filter by author LiNk-NY opened on Feb 13, 2025
  1

  

• gdcdata should not depend on internet connection when cache=TRUE and you have all the files in your local cache

  Bioconductor/GenomicDataCommons#97 · Filter by author hermidalc opened on Mar 1, 2022
  1

• Making GenomicDataCommons less daunting to use for the average user

  Bioconductor/GenomicDataCommons#94 · Filter by author hermidalc opened on Feb 22, 2022

• Querying a previous GDC data release version

  Bioconductor/GenomicDataCommons#81 · Filter by author hermidalc opened on Sep 9, 2020

• Add TSV return format support

  enhancement
  Bioconductor/GenomicDataCommons#75 · Filter by author seandavi opened on Jan 28, 2020
  

• Add support for GraphQL endpoint

  enhancement
  Bioconductor/GenomicDataCommons#74 · Filter by author seandavi opened on Jan 28, 2020
  

• Progress Bar Should Display Download Speed

  Bioconductor/GenomicDataCommons#73 · Filter by author DarioS opened on Jul 8, 2019

• Clinical data are empty

  Bioconductor/GenomicDataCommons#70 · Filter by author bioinfo-dirty-jobs opened on Apr 24, 2019
  3

• Problems on Download some Methylation Beta Value from server

  Bioconductor/GenomicDataCommons#68 · Filter by author bioinfo-dirty-jobs opened on Apr 5, 2019

• How to download data using only the samples have normal samples.

  Bioconductor/GenomicDataCommons#64 · Filter by author bioinfo-dirty-jobs opened on Sep 3, 2018

• available_rna_seq_workflow returns NULL

  Bioconductor/GenomicDataCommons#63 · Filter by author robin073 opened on Aug 28, 2018

• gdc_rnaseq.R: gdc_rnaseq() on workflows other than "HTSeq - Counts" produce errors

  Bioconductor/GenomicDataCommons#62 · Filter by author lyijin opened on Jul 17, 2018
  2

• gdc_rnaseq.R: available_rnaseq_workflows() returns NULL

  Bioconductor/GenomicDataCommons#61 · Filter by author lyijin opened on Jul 17, 2018

• extract clinical data from previous research

  Bioconductor/GenomicDataCommons#52 · Filter by author bioinfo-dirty-jobs opened on May 16, 2018
  4

• Check and retry request with 429 errors

  Bioconductor/GenomicDataCommons#50 · Filter by author seandavi opened on Apr 26, 2018

• expand for deeply-nested fields

  Bioconductor/GenomicDataCommons#47 · Filter by author brisk022 opened on Oct 5, 2017
  2

• Catch ssl handshake error and suggest fix

  enhancement
  Bioconductor/GenomicDataCommons#38 · Filter by author seandavi opened on Mar 4, 2017
  

• facets and filters not working when specified together.

  enhancement
  Bioconductor/GenomicDataCommons#27 · Filter by author seandavi opened on Jan 8, 2017
  1

  

• Describe RESTful APIs in overview vignette

  enhancement
  Bioconductor/GenomicDataCommons#2 · Filter by author seandavi opened on Jun 20, 2016