Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
Accelerator
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Type
/
to search
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
Uh oh!
There was an error while loading.
Please reload this page
.
BiocPy
/
DelayedArray
Public
Notifications
You must be signed in to change notification settings
Fork
0
Star
1
Code
Issues
2
Pull requests
0
Actions
Projects
Security and quality
0
Insights
Additional navigation options
Code
Issues
Pull requests
Actions
Projects
Security and quality
Insights
Commits
Breadcrumbs
History for
DelayedArray
tests
on
master
User selector
All users
All time
Commit history
Commits on Dec 13, 2025
Centralize the choice of a default buffer size for apply.
LTLA
committed
24d6235
View commit details
Copy full SHA for 24d6235
View code at this point
Browse repository at this point
Commits on May 7, 2025
Support single-integer slicing of DelayedArrays, SparseNdarrays.
Show description for 1cac85e
LTLA
committed
1cac85e
View commit details
Copy full SHA for 1cac85e
View code at this point
Browse repository at this point
Commits on Dec 19, 2024
Collapse repeated operations to remove unnecessary delayed layers. (#66)
Show description for a9f50fe
LTLA
authored
a9f50fe
View commit details
Copy full SHA for a9f50fe
View code at this point
Browse repository at this point
Commits on Dec 6, 2024
Avoid cast to float when operating on uint64 indices in a SparseNdarray.
LTLA
committed
01dcf27
View commit details
Copy full SHA for 01dcf27
View code at this point
Browse repository at this point
Coerce numpy.generic instances to dtypes in SparseNdarray constructor.
Show description for aa50f4c
LTLA
committed
aa50f4c
View commit details
Copy full SHA for aa50f4c
View code at this point
Browse repository at this point
Commits on Oct 23, 2024
Support dtype= and copy= arguments in __array__(), as required by numpy 2. (#64)
LTLA
authored
538d459
View commit details
Copy full SHA for 538d459
View code at this point
Browse repository at this point
Added getters for the RegularTick properties, for convenience.
LTLA
committed
622de03
View commit details
Copy full SHA for 622de03
View code at this point
Browse repository at this point
Commits on May 24, 2024
Add support for more numpy functions to dense and sparse `DelayedArrays` (#62)
Show description for 1833910
jkanche
authored
1833910
View commit details
Copy full SHA for 1833910
View code at this point
Browse repository at this point
Commits on Feb 1, 2024
Protect against out-of-range negative indices for RegularTicks.
LTLA
committed
87b7525
View commit details
Copy full SHA for 87b7525
View code at this point
Browse repository at this point
Cleaned up the internal subsetting utilities.
Show description for 3c2381e
LTLA
committed
3c2381e
View commit details
Copy full SHA for 3c2381e
View code at this point
Browse repository at this point
Switch to Grid classes to control how iteration is performed. (#61)
Show description for 3117799
LTLA
authored
3117799
View commit details
Copy full SHA for 3117799
View code at this point
Browse repository at this point
Commits on Jan 30, 2024
Added buffer_size= option to apply_over_* functions for convenience.
Show description for 4892daf
LTLA
committed
4892daf
View commit details
Copy full SHA for 4892daf
View code at this point
Browse repository at this point
Renamed the SciPy conversion functions and made them generics.
Show description for 585feb7
LTLA
committed
585feb7
View commit details
Copy full SHA for 585feb7
View code at this point
Browse repository at this point
Handle zero-extent arrays during apply_over_* functions.
Show description for 4c12481
LTLA
committed
4c12481
View commit details
Copy full SHA for 4c12481
View code at this point
Browse repository at this point
Do not sanitize no-op masks on ndarrays during test assertions.
Show description for bed54ba
LTLA
committed
bed54ba
View commit details
Copy full SHA for bed54ba
View code at this point
Browse repository at this point
Testfix for the ndarray assertions.
Show description for aa6fccc
LTLA
committed
aa6fccc
View commit details
Copy full SHA for aa6fccc
View code at this point
Browse repository at this point
Use block processing to compute basic statistics from a DelayedArray. (#59)
Show description for 5eb6897
LTLA
authored
5eb6897
View commit details
Copy full SHA for 5eb6897
View code at this point
Browse repository at this point
Bugfix for NaN-safe equality checks in tests.
LTLA
committed
5721e67
View commit details
Copy full SHA for 5721e67
View code at this point
Browse repository at this point
Commits on Jan 29, 2024
Added basic statistics (mean/sum/var) for SparseNdarrays.
LTLA
committed
d95b8e5
View commit details
Copy full SHA for d95b8e5
View code at this point
Browse repository at this point
Added a copy method for SparseNdarrays.
LTLA
committed
a7b29d2
View commit details
Copy full SHA for a7b29d2
View code at this point
Browse repository at this point
Provide converters from SparseNdarrays to SciPy sparse matrices.
LTLA
committed
c7b2a87
View commit details
Copy full SHA for c7b2a87
View code at this point
Browse repository at this point
Subset is now mandatory in extract_*_array calls.
Show description for a5ec2e2
LTLA
committed
a5ec2e2
View commit details
Copy full SHA for a5ec2e2
View code at this point
Browse repository at this point
Require all arrays to explicitly set an is_masked method.
Show description for 09ebc13
LTLA
committed
09ebc13
View commit details
Copy full SHA for 09ebc13
View code at this point
Browse repository at this point
Minor testfix for masked value comparison.
LTLA
committed
b2d33e7
View commit details
Copy full SHA for b2d33e7
View code at this point
Browse repository at this point
Commits on Jan 28, 2024
Support masking throughout the various operations and methods. (#57)
Show description for c91e707
LTLA
authored
c91e707
View commit details
Copy full SHA for c91e707
View code at this point
Browse repository at this point
Commits on Jan 23, 2024
Support the delayed unary logical_not operation.
LTLA
committed
5c6bb14
View commit details
Copy full SHA for 5c6bb14
View code at this point
Browse repository at this point
Commits on Jan 22, 2024
Minor testfix for automatic dtype inference.
LTLA
committed
2d9e426
View commit details
Copy full SHA for 2d9e426
View code at this point
Browse repository at this point
Bugfix and extra tests for default block shape/sizes in the apply().
LTLA
committed
21ba026
View commit details
Copy full SHA for 21ba026
View code at this point
Browse repository at this point
Commits on Jan 21, 2024
Added utilities to iterate over dimensions or blocks.
Show description for 19d821f
LTLA
committed
19d821f
View commit details
Copy full SHA for 19d821f
View code at this point
Browse repository at this point
Commits on Sep 28, 2023
Bugfix for row-wise combining of 2D SparseNdarrays.
LTLA
committed
0b5fdb5
View commit details
Copy full SHA for 0b5fdb5
View code at this point
Browse repository at this point
Commits on Sep 27, 2023
Reorganized tests to more appropriate files.
Show description for 909dabd
LTLA
committed
909dabd
View commit details
Copy full SHA for 909dabd
View code at this point
Browse repository at this point
Introduced wrap generic to dispatch construction to third-party subclasses. (#54)
Show description for 102bae5
LTLA
authored
102bae5
View commit details
Copy full SHA for 102bae5
View code at this point
Browse repository at this point
Commits on Sep 26, 2023
Consolidated the __repr__ code across DelayedArray, SparseNdarray.
Show description for 814a11b
LTLA
committed
814a11b
View commit details
Copy full SHA for 814a11b
View code at this point
Browse repository at this point
Switch to generics instead of using __DelayedArray methods.
Show description for ccd578d
LTLA
committed
ccd578d
View commit details
Copy full SHA for ccd578d
View code at this point
Browse repository at this point
Added extract_sparse_array methods for all scipy sparse matrices. (#53)
Show description for 78f890c
LTLA
authored
78f890c
View commit details
Copy full SHA for 78f890c
View code at this point
Browse repository at this point
Previous
Next
You can’t perform that action at this time.