Commits

Commit history

1. Commits on Apr 26, 2016

   • autotesting

     brianjohnhaas

     committed
     4c56120View commit details

     Copy full SHA for 4c56120

     View code at this pointBrowse repository at this point

   • adding autorun

     brianjohnhaas

     committed
     f12407dView commit details

     Copy full SHA for f12407d

     View code at this pointBrowse repository at this point

   • update, improved reporting

     brianjohnhaas

     committed
     3f5802aView commit details

     Copy full SHA for 3f5802a

     View code at this pointBrowse repository at this point

   • prioritize according to model len not gene len

     brianjohnhaas

     committed
     c561afcView commit details

     Copy full SHA for c561afc

     View code at this pointBrowse repository at this point

   • use pfam and blast by default in example

     brianjohnhaas

     committed
     129dac6View commit details

     Copy full SHA for 129dac6

     View code at this pointBrowse repository at this point

   • adding precomputed blast and pfam here

     brianjohnhaas

     committed
     30451adView commit details

     Copy full SHA for 30451ad

     View code at this pointBrowse repository at this point

   • additional reporting of kept cats

     brianjohnhaas

     committed
     014aac5View commit details

     Copy full SHA for 014aac5

     View code at this pointBrowse repository at this point

   • include pasa gene-to-trans mapping

     brianjohnhaas

     committed
     0996e44View commit details

     Copy full SHA for 0996e44

     View code at this pointBrowse repository at this point

   • updating pasa assembly test

     brianjohnhaas

     committed
     bd5d54bView commit details

     Copy full SHA for bd5d54b

     View code at this pointBrowse repository at this point

   • include phasing info, allow for single best orf

     brianjohnhaas

     committed
     935da38View commit details

     Copy full SHA for 935da38

     View code at this pointBrowse repository at this point
2. Commits on Apr 23, 2016

   • Make the sample data reproducible

     Show description for 6d72091
     mr-c

     committed
     6d72091View commit details

     Copy full SHA for 6d72091

     View code at this pointBrowse repository at this point
3. Commits on Feb 10, 2016

   • add

     brianjohnhaas

     committed
     708d6dcView commit details

     Copy full SHA for 708d6dc

     View code at this pointBrowse repository at this point

   • add

     brianjohnhaas

     committed
     923aedfView commit details

     Copy full SHA for 923aedf

     View code at this pointBrowse repository at this point

   • add

     brianjohnhaas

     committed
     fc2643eView commit details

     Copy full SHA for fc2643e

     View code at this pointBrowse repository at this point

   • update

     brianjohnhaas

     committed
     805590aView commit details

     Copy full SHA for 805590a

     View code at this pointBrowse repository at this point

   • add

     brianjohnhaas

     committed
     a8d1791View commit details

     Copy full SHA for a8d1791

     View code at this pointBrowse repository at this point
4. Commits on Jan 26, 2015

   • update

     brianjohnhaas

     committed
     27b0fc6View commit details

     Copy full SHA for 27b0fc6

     View code at this pointBrowse repository at this point

   • bugfix to recently introduced bug - count models and transcripts separately now

     brianjohnhaas

     committed
     581f5ccView commit details

     Copy full SHA for 581f5cc

     View code at this pointBrowse repository at this point

   • update to new format

     brianjohnhaas

     committed
     bb90ff6View commit details

     Copy full SHA for bb90ff6

     View code at this pointBrowse repository at this point

   • update

     brianjohnhaas

     committed
     cb033a4View commit details

     Copy full SHA for cb033a4

     View code at this pointBrowse repository at this point

   • add

     brianjohnhaas

     committed
     eec2bccView commit details

     Copy full SHA for eec2bcc

     View code at this pointBrowse repository at this point
5. Commits on Jan 25, 2015

   • rm

     brianjohnhaas

     committed
     4ef1e88View commit details

     Copy full SHA for 4ef1e88

     View code at this pointBrowse repository at this point

   • add, initial code revision... still requires fine-tuning to make it work now

     brianjohnhaas

     committed
     ea90973View commit details

     Copy full SHA for ea90973

     View code at this pointBrowse repository at this point
6. Loading